B i o l o g i c a l    N e t w o r k s


Publications

Peer-Reviewed Journals

19) Kaiser M, Hilgetag CC, van Ooyen A. Random outgrowth and spatial competition generate realistic connection length distributions and filling fractions. (in preparation)

18) Kaiser M Feedback loops in complex networks: The topological origin of brain rhythms. (submitted)

17) Kaiser M. On clustering measures for small-world networks. (submitted)

16) Costa LdF, Kaiser M, Hilgetag CC. Beyond the average: detecting global singular nodes from local features in complex networks. (submitted)


15) Roopun A, Kramer M, Carracedo L, Kaiser M, Davies C, Traub R, Kopell N, Whittington M (2008). Period concatenation underlies interactions between gamma and beta rhythms in neocortex. Frontiers in Cellular Neuroscience, 2:1 [Article (PDF)]

14) Kaiser M (2007). Brain architecture: a design for natural computation. Philosophical Transactions of the Royal Society A, 365:3033-3045 [Article (PDF)]

13) Nisbach F, Kaiser M (2007). Developmental time windows for spatial growth generate multiple-cluster small-world networks. European Physical Journal B 58:185-191 [Article (PDF)]

12) Kaiser M, Martin R, Andras P, Young MP (2007). Simulation of robustness against lesions of cortical networks. European Journal of Neuroscience 25:3185-3192 [Article (PDF)]

11) Kaiser M, Görner M, Hilgetag CC (2007). Criticality of spreading dynamics in hierarchical cluster networks without inhibition. New Journal of Physics 9:110 [Article (PDF)]

10) Costa LdF, Kaiser M, Hilgetag CC (2007). Predicting the connectivity of primate cortical networks from topological and spatial node properties. BMC Systems Biology 1:16 [Article (PDF)]

9) Kaiser M, Hilgetag CC (2007). Development of multi-cluster cortical networks by time windows for spatial growth. Neurocomputing 70:1829-1832 [Article (PDF)]

8) Lappe M, Kuhlmann S, Oerke B, Kaiser M (2006). The fate of object features during perisaccadic mislocalization. Journal of Vision 6:1282-1293 [Article (PDF)]

7) Kaiser M, Hilgetag CC (2006). Nonoptimal Component Placement, but Short Processing Paths, due to Long-Distance Projections in Neural Systems. PLoS Computational Biology 7:e95 [Article]   [Supplementary Information (Data Sets)]

6) Sporns O, Chialvo DR, Kaiser M, Hilgetag CC (2004) Organization, Development and Function of Complex Brain Networks. Trends in Cognitive Sciences 8:418-425 [Article (PDF)]  [BibTeX]  

5) Hilgetag CC, Kaiser M (2004) Clustered organisation of cortical connectivity. Neuroinformatics 2:353-360 [Article (PDF)]  [BibTeX]  

4) Kaiser M, Hilgetag CC (2004) Modelling the development of cortical networks. Neurocomputing 58-60:297-302 [Article (PDF)]  [BibTeX]

3) Kaiser M, Hilgetag CC (2004)  Edge vulnerability in neural and metabolic networks. Biological Cybernetics 90:311-317 [Article (PDF)]  [BibTeX] q-bio.NC/0403015

2) Kaiser M, Hilgetag CC (2004) Spatial growth of real-world networks. Physical Review E 69:036103  [Abstract]  [Article (PDF)]  [BibTeX]  cond-mat/0312037

1) Kaiser M, Lappe M (2004) Perisaccadic mislocalization orthogonal to saccade direction. Neuron 41:293-300  [Abstract]  [Article (PDF)]  [BibTeX]  [Supplementary Information]   






TiCS-Cover

Book Chapters

4) Kaiser M, Simonotto J. Structural and Functional Dynamics in Cortical and Neuronal Networks. In: Analysis of Complex Networks: From Biology to Linguistics. Wiley-VCH (submitted).

3) Kaiser M, Simonotto J. Limited Spreading: How Hierarchical Networks prevent the Transition to the Epileptic State. In: Modeling Phase Transitions in the Brain. Springer (submitted).


2) Kaiser M (2008) Multiple-scale hierarchical connectivity of cortical networks limits the spread of activity. In: Soltesz & Staley, Computational Neuroscience of Epilepsy, Academic Press.

1) Hilgetag CC, Kaiser M (2008) Organization and Function of Complex Cortical Networks. In: beim Graben P, Zhou C, Thiel M, Kurths J (Eds), "Super-Computational Neuroscience: Complex Networks in Brain Dynamics". Lecture Notes in Physics, Springer.



Conference Proceedings

1) L.S. Smith, J. Austin, S. Baker, R. Borisyuk, S. Eglen, J. Feng, K. Gurney, T. Jackson, M. Kaiser, P. Overton, S. Panzeri, R. Quian Quiroga, S.R. Schultz, E. Sernagor, V.A. Smith, T.V. Smulders, L. Stuart, M. Whittington, C. Ingram. The CARMEN e-Science pilot project: Neuroinformatics work packages. , Proceedings of the UK e-Science All Hands Meeting, 591-598, 2007



Conference Abstracts

29) Kaiser M (2008) Feedback loops and oscillations in modular hierarchical brain networks: the topological origin of brain rhythms. International Workshop and Conference on Network Science. Norwich, UK (oral presentation)

28) Simonotto J, Eglen S, Echtermeyer C, Adams C, Kaiser M, Sernagor E (2008) Using CARMEN resources for high throughput and multimodal analysis of neural network dynamics in developing retina. International Workshop and Conference on Network Science. Norwich, UK

27) Kaiser M (2008) Feedback Loops in Hierarchical Neuronal Networks: On the Topological Origin of Brain Oscillations. 1st INCF Congress of Neuroinformatics. Stockholm, Sweden

26) Simonotto J, Eglen S, Echtermeyer C, Adams C, Kaiser M, Sernagor E (2008) Using CARMEN resources for high throughput multi-modal analysis and algorithm development. Society for Neuroscience Abstracts, Vol. 34

25) Kaiser M (2008) Network topology influences feedback loops and cortical rhythms. Mathematical Neuroscience Workshop. Edinburgh, UK

24) Simonotto J, Eglen S, Echtermeyer C, Adams C, Kaiser M, Sernagor E (2008) Leveraging CARMEN Resources for Multi-modal Analysis of MEA Data. 6th International Meeting on Substrate-Integrated Micro Electrode Arrays; Reutlingen, Germany

23) Kaiser M, Hilgetag CC (2007) Critical topology of seizure spreading: Hierarchically clustered neural connectivity prevents large-scale network activation. Society for Neuroscience Abstracts, Vol. 33 (oral presentation)

22) Eglen SJ, Adams C, Echtermeyer C, Kaiser M, Simonotto J, Sernagor E (2007) The CARMEN project: Large-scale analysis of spontaneous retinal activity during development. European Retina Meeting, Frankfurt

21) Smith L et al. (2007) The CARMEN e-Science pilot project: Neuroinformatics work packages. UK e-science all hands meeting, Nottingham.

20) Kaiser M (2007) Critical paths for seizure spreading: Hierarchical cortical connectivity pre- vents large-scale brain activation.Workshop: Invasive intracranial electrophysiology of the human brain: non-clinical studies of epilepsy patients. King’s College London

19) Hilgetag CC, Kaiser M, Costa LdF (2007) Reconstructing neural networks from local featues. 11th International Conference on Cognitive and Neural Systems

18) Kaiser M, Hilgetag CC (2006) Development of multi-cluster cortical networks by time windows for spatial growth. Conference of the Computational Neuroscience Society.

17) Hilgetag CC, Goerner M, Kaiser M (2006) Functional criticality of clustered cortical networks. 10th International Conference on Cognitive and Neural Systems

16) Kaiser M, Hilgetag CC (2005) Sub-optimal component placement in primate cortical and C. elegans neural networks and alternative functional constraints for the wiring of neural systems. Society for Neuroscience Abstracts, Vol. 31 (oral presentation)

15) Kaiser M (2005) The large-scale architecture of neural systems: topology, spatial organization, and robustness of cortical networks. Theoretical Neuroscience Meeting (oral presentation)

14) Kaiser M, Hilgetag CC (2005) Test of optimal component placement in macaque and C. elegans neural networks. Conference of the Computational Neuroscience Society.

13) Kaiser M (2005) Which constraints shape brain connectivity? 9th International Conference on Cognitive and Neural Systems (oral presentation)

12) Kaiser M, Hilgetag CC (2005) Development and Robustness of Cortical Brain Networks. 69th Conference of the German Physics Society (DPG), SYBN 3.27

11) Hilgetag CC, Kaiser M (2005) Organization of Cortical Brain Networks. 69th Conference of the German Physics Society (DPG), SYBN 3.28

10) Kaiser M., Hilgetag C.-C. (2004) Clustered cortical architecture: Development and robustness. In Abstracts of the 2004 Annual Conference of the Society for Neuroscience, San Diego [Poster (PDF)]

9) Kaiser M. (2004) Structural patterns underlying robustness in neural systems. 8th International Conference on Cognitive and Neural Systems

8) Kaiser M., Hilgetag C.-C. (2004) Spatial development of cortical networks: Essential factors for generating clusters and long-range connections. 4th Forum of European Neuroscience (FENS)

7) Oerke B., Kaiser M. and Lappe M. (2004). Seeing green on green. In Abstracts of the 2004 Tübinger Wahrnehmungskonferenz (TWK)

6) Kaiser M., and Hilgetag C.-C. (2003). Modelling the development of cortical networks. Conference of the Computational Neuroscience Society

5) Kaiser M., and Hilgetag C.-C. (2003). A model for the development of global cortico-cortical connectivity. International Conference on Cognitive and Neural Systems

4) Lappe M., Kaiser M., and Awater H. (2002). Visual Factors in Peri-saccadic Compression of Space. Visual Localization in Space-Time (pre-ECVP conference).

3) Kaiser M., and Lappe M. (2002). Perisaccadic compression of space orthogonal to saccade direction. Abstract of the 2002 Annual Conference of the Vision Sciences Society

2) Kaiser M., and Lappe M. (2002). Perisakkadische Kompression in zwei Dimensionen. In Abstracts of the 2002 Tübinger Wahrnehmungskonferenz (TWK)

1) Martin R., Kaiser M., Andras P., and Young M.P. (2001). Is the Brain a Scale-free Network? In Abstracts of the 2001 Annual Conference of the Society for Neuroscience, San Diego, US, paper 816.14


Other publications

3) F Gibson, P Overton, T Smulders, S Schultz, SJ Eglen5, CD Ingram, S Panzeri, P Bream, E Sernagor, M Cunningham, C Adams, C Echtermeyer, J Simonotto, M Kaiser, DC Swan, M Fletcher, P Lord. Minimum Information about a Neuroscience Investigation (MINI) Electrophysiology. Nature Precedings 1720.1, 2008.

2) Hilgetag CC, Kaiser M. (2005) Die Netzwerk-Struktur biologischer Systeme. BIOforum 4:32-33 [Article (PDF)]

1) Kaiser M. (2005) Spatial network growth: Generating small-world, scale-free, and multi-cluster spatial networks. International University Bremen Technical Report No. 1 [Article (PDF)]  [BibTeX]


Press coverage

3) Lange Leitungen. Die Zeit, 10 August 2006

2) BBC Newcastle radio interview. 1 August 2006

1) Peter Riesbeck: Mobile Eliten. Berliner Zeitung, 14 April 2005 [Article (PDF)]




Author: M. Kaiser 
Homepage:  http://www.biological-networks.org
Date: 18 June 2008